U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Y54E5A.8 Conserved plasma membrane protein;Pyridoxamine 5'-phosphate oxidase;Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 173333, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
Y54E5A.8
Official Full Name
Conserved plasma membrane protein;Pyridoxamine 5'-phosphate oxidase;Uncharacterized protein
Primary source
WormBase:WBGene00013203
Locus tag
CELE_Y54E5A.8
See related
AllianceGenome:WB:WBGene00013203
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Y54E5A.8 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (14716598..14719027)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Polysaccharide biosynthesis domain-containing protein Neighboring gene DRBM domain-containing protein Neighboring gene B30.2/SPRY domain-containing protein;CTLH domain-containing protein Neighboring gene Proteasome subunit pbs-5 Neighboring gene Protein jagunal homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Conserved plasma membrane protein;Pyridoxamine 5'-phosphate oxidase;Uncharacterized protein
NP_001252414.1
  • Confirmed by transcript evidence
NP_001252415.1
  • Confirmed by transcript evidence
NP_001252416.1
  • Confirmed by transcript evidence
NP_493556.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    14716598..14719027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061155.7 → NP_493556.2  Conserved plasma membrane protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EG37

  2. NM_001265485.3 → NP_001252414.1  Uncharacterized protein CELE_Y54E5A.8 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001252414.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EDT3

  3. NM_001265486.3 → NP_001252415.1  Uncharacterized protein CELE_Y54E5A.8 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001252415.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GUF9

  4. NM_001265487.3 → NP_001252416.1  Pyridoxamine 5'-phosphate oxidase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001252416.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GUG0

RNA

  1. NR_132619.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools