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T01D1.4 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog;putative inactive acireductone dioxygenase 1 [ Caenorhabditis elegans ]

Gene ID: 173403, updated on 2-Nov-2024

Summary

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Official Symbol
T01D1.4
Official Full Name
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog;putative inactive acireductone dioxygenase 1
Primary source
WormBase:WBGene00020149
Locus tag
CELE_T01D1.4
See related
AllianceGenome:WB:WBGene00020149
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acireductone dioxygenase [iron(II)-requiring] activity. Predicted to be involved in methionine metabolic process. Predicted to be located in cytoplasm and nucleus. Orthologous to human ADI1 (acireductone dioxygenase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T01D1.4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (176997..179093, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene ZP domain-containing protein Neighboring gene Serpentine receptor class gamma Neighboring gene Activated in Blocked Unfolded protein response

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acireductone dioxygenase [iron(II)-requiring] activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables acireductone dioxygenase [iron(II)-requiring] activity IEA
Inferred from Electronic Annotation
more info
  
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in methionine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog;putative inactive acireductone dioxygenase 1
NP_001300589.1
  • Confirmed by transcript evidence
NP_493676.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    176997..179093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061275.9 → NP_493676.1  putative inactive acireductone dioxygenase 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493676.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P91416
    Conserved Domains (1) summary
    pfam03079
    Location:2 → 158
    ARD; ARD/ARD' family

  2. NM_001313660.3 → NP_001300589.1  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AU20
    Conserved Domains (1) summary
    cl21464
    Location:1 → 109
    cupin_like; Conserved domain found in cupin and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P91416.1

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