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cbn-1 EF-hand domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173423, updated on 2-Nov-2024

Summary

Official Symbol
cbn-1
Official Full Name
EF-hand domain-containing protein
Primary source
WormBase:WBGene00019285
Locus tag
CELE_K01A2.11
See related
AllianceGenome:WB:WBGene00019285
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See cbn-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
11
Sequence:
Chromosome: II; NC_003280.10 (328564..332519, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene CCDC92 domain-containing protein;CCDC92/74 N-terminal domain-containing protein Neighboring gene Beta-sarcoglycan Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Calponin-homology (CH) domain-containing protein;Transgelin

General protein information

Preferred Names
EF-hand domain-containing protein
NP_001022226.1
  • Confirmed by transcript evidence
NP_493711.2
  • Confirmed by transcript evidence
NP_493712.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    328564..332519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001027055.5NP_001022226.1  EF-hand domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022226.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KY97
    Conserved Domains (2) summary
    pfam13499
    Location:88142
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:407461
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
  2. NM_061310.6NP_493711.2  EF-hand domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493711.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KY96
    Conserved Domains (2) summary
    pfam13499
    Location:88142
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:407461
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
  3. NM_061311.6NP_493712.1  EF-hand domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493712.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TZ47
    Conserved Domains (2) summary
    pfam13499
    Location:88142
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:407461
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RNA

  1. NR_132575.1 RNA Sequence

    Status: REVIEWED