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shc-2 SH2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173860, updated on 2-Nov-2024

Summary

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Official Symbol
shc-2
Official Full Name
SH2 domain-containing protein
Primary source
WormBase:WBGene00020867
Locus tag
CELE_T27F7.2
See related
AllianceGenome:WB:WBGene00020867
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human SH2D5 (SH2 domain containing 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See shc-2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Sequence:
Chromosome: II; NC_003280.10 (4969163..4988940)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene SUI1 domain-containing protein Neighboring gene Mannosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microtubule severing by the katanin complex is activated by PPFR-1-dependent MEI-1 dephosphorylation. Gomes JE, et al. J Cell Biol, 2013 Aug 5. PMID 23918937, Free PMC Article
  2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SH2 domain-containing protein
NP_001379992.1
  • Confirmed by transcript evidence
NP_001379993.1
  • Confirmed by transcript evidence
NP_494915.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4969163..4988940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001393059.1 → NP_001379993.1  SH2 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q967F3
    Conserved Domains (2) summary
    cd00173
    Location:444 → 527
    SH2; Src homology 2 (SH2) domain
    cl17171
    Location:142 → 258
    PH-like; Pleckstrin homology-like domain

  2. NM_062514.4 → NP_494915.2  SH2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494915.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L092
    Conserved Domains (2) summary
    cd00173
    Location:454 → 537
    SH2; Src homology 2 (SH2) domain
    cl17171
    Location:152 → 268
    PH-like; Pleckstrin homology-like domain

  3. NM_001393060.1 → NP_001379992.1  SH2 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L091
    Conserved Domains (1) summary
    cd00173
    Location:169 → 252
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
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