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msp-50 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [ Caenorhabditis elegans ]

Gene ID: 173890, updated on 2-Nov-2024

Summary

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Official Symbol
msp-50
Official Full Name
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
Primary source
WormBase:WBGene00003443
Locus tag
CELE_C34F11.4
See related
AllianceGenome:WB:WBGene00003443
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in gonad; oocyte; and sperm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See msp-50 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003280.10 (5199797..5200180)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Major sperm protein 49 Neighboring gene Tyrosine-protein kinase Neighboring gene AMP deaminase Neighboring gene Glycine-rich protein Neighboring gene DUF4440 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic organization of major sperm protein genes and pseudogenes in the nematode Caenorhabditis elegans. Ward S, et al. J Mol Biol, 1988 Jan 5. PMID 3351915
  2. Clustered organization of reproductive genes in the C. elegans genome. Miller MA, et al. Curr Biol, 2004 Jul 27. PMID 15268860
  3. Gamma radiation induces life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis. Maremonti E, et al. Sci Total Environ, 2019 Dec 10. PMID 31425988
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
NP_494972.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5199797..5200180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062571.10 → NP_494972.1  Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494972.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53017
    Conserved Domains (1) summary
    pfam00635
    Location:9 → 114
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53017.2

Gene LinkOut

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Molecular Biology Databases
Research Materials