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C17G10.6 ShKT domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173948, updated on 18-Sep-2024

Summary

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Official Symbol
C17G10.6
Official Full Name
ShKT domain-containing protein
Primary source
WormBase:WBGene00015918
Locus tag
CELE_C17G10.6
See related
AllianceGenome:WB:WBGene00015918
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See C17G10.6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
9
Sequence:
Chromosome: II; NC_003280.10 (5599908..5603294, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Cns1/TTC4 wheel domain-containing protein Neighboring gene uS12 prolyl 3-hydroxylase Neighboring gene DUF4440 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Transmembrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
ShKT domain-containing protein
NP_001021970.1
  • Partially confirmed by transcript evidence
NP_001021971.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5599908..5603294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026799.2 → NP_001021970.1  ShKT domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021970.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KYU5

  2. NM_001026800.2 → NP_001021971.1  ShKT domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021971.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JPE6
Nucleotide Protein
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