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ift-43 Intraflagellar transport protein 43 homolog [ Caenorhabditis elegans ]

Gene ID: 173959, updated on 2-Nov-2024

Summary

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Official Symbol
ift-43
Official Full Name
Intraflagellar transport protein 43 homolog
Primary source
WormBase:WBGene00016121
Locus tag
CELE_C25H3.12
See related
AllianceGenome:WB:WBGene00016121
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cilium. Is expressed in ciliated neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ift-43 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (5659881..5660786, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Bromo domain-containing protein Neighboring gene Alpha-(1,3)-fucosyltransferase fut-3 Neighboring gene TFIIS N-terminal domain-containing protein Neighboring gene Secreted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynein-Driven Retrograde Intraflagellar Transport Is Triphasic in C. elegans Sensory Cilia. Yi P, et al. Curr Biol, 2017 May 22. PMID 28479320
  2. The relationship between intraflagellar transport and upstream protein trafficking pathways and macrocyclic lactone resistance in Caenorhabditis elegans. Brinzer RA, et al. G3 (Bethesda), 2024 Mar 6. PMID 38227795, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cilium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Intraflagellar transport protein 43 homolog
NP_495107.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5659881..5660786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062706.4 → NP_495107.1  Intraflagellar transport protein 43 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495107.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9BIA4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9BIA4.1

Gene LinkOut

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