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ttc-39B TeTratriCopeptide repeat domain protein related [ Caenorhabditis elegans ]

Gene ID: 174046, updated on 18-Sep-2024

Summary

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Official Symbol
ttc-39B
Official Full Name
TeTratriCopeptide repeat domain protein related
Primary source
WormBase:WBGene00016314
Locus tag
CELE_C32D5.6
See related
AllianceGenome:WB:WBGene00016314
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human TTC39A (tetratricopeptide repeat domain 39A) and TTC39B (tetratricopeptide repeat domain 39B). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See ttc-39B in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (6331820..6333987, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Histone-lysine N-methyltransferase Suv4-20 Neighboring gene DUF2934 domain-containing protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
TeTratriCopeptide repeat domain protein related
NP_495273.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class ttc

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    6331820..6333987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062872.7 → NP_495273.1  TeTratriCopeptide repeat domain protein related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495273.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09266
    Conserved Domains (1) summary
    pfam10300
    Location:44 → 494
    DUF3808; Protein of unknown function (DUF3808)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q09266.1

Gene LinkOut

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