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T25D10.1 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 174062, updated on 2-Nov-2024

Summary

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Official Symbol
T25D10.1
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00020799
Locus tag
CELE_T25D10.1
See related
AllianceGenome:WB:WBGene00020799
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T25D10.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (6403401..6405040)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Ig-like domain-containing protein Neighboring gene ncRNA Neighboring gene BTB domain-containing protein Neighboring gene Leguminosin group485 secreted peptide;Saposin B-type domain-containing protein;Saposin-like protein 11 Neighboring gene Uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 
involved_in macromolecule glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Uncharacterized protein
NP_495290.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    6403401..6405040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062889.7 → NP_495290.2  Uncharacterized protein CELE_T25D10.1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495290.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q10017
    Conserved Domains (1) summary
    cl16914
    Location:56 → 306
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q10017.2

Gene LinkOut

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