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C56E6.2 Ras-related protein Rab-21 [ Caenorhabditis elegans ]

Gene ID: 174077, updated on 2-Nov-2024

Summary

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Official Symbol
C56E6.2
Official Full Name
Ras-related protein Rab-21
Primary source
WormBase:WBGene00016970
Locus tag
CELE_C56E6.2
See related
AllianceGenome:WB:WBGene00016970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable GTPase activity. Predicted to be involved in intracellular protein transport. Predicted to be active in endomembrane system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C56E6.2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (6524927..6526324)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Doublecortin domain-containing protein Neighboring gene ncRNA Neighboring gene ABC transporter domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ras-related protein Rab-21
NP_495318.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    6524927..6526324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062917.8 → NP_495318.2  Ras-related protein Rab-21 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495318.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18898
    Conserved Domains (2) summary
    cd00154
    Location:54 → 200
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    COG1100
    Location:50 → 264
    Gem1; GTPase SAR1 family domain [General function prediction only]
Nucleotide Protein
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