U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rol-8 Cuticle collagen 6 [ Caenorhabditis elegans ]

Gene ID: 174226, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
rol-8
Official Full Name
Cuticle collagen 6
Primary source
WormBase:WBGene00004398
Locus tag
CELE_ZK1290.3
See related
AllianceGenome:WB:WBGene00004398
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rol-8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (7544108..7545335)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein Neighboring gene Nuclear factor I family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene F-box A protein 224

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Distinct transcriptomic responses of Caenorhabditis elegans to pristine and sulfidized silver nanoparticles. Starnes DL, et al. Environ Pollut, 2016 Jun. PMID 26925754
  2. Genes that can be mutated to unmask hidden antigenic determinants in the cuticle of the nematode Caenorhabditis elegans. Politz SM, et al. Proc Natl Acad Sci U S A, 1990 Apr. PMID 1691498, Free PMC Article
  3. Cuticle chirality and body handedness in Caenorhabditis elegans. Bergmann DC, et al. Dev Genet, 1998. PMID 9842711
  4. Sequence comparisons of developmentally regulated collagen genes of Caenorhabditis elegans. Cox GN, et al. Gene, 1989. PMID 2753356
  5. Domain organization and intron positions in Caenorhabditis elegans collagen genes: the 54-bp module hypothesis revisited. Fields C. J Mol Evol, 1988 Dec-1989 Feb. PMID 3148742

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural constituent of cuticle IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of collagen trimer IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Cuticle collagen 6
NP_495582.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7544108..7545335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063181.7 → NP_495582.1  Cuticle collagen 6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495582.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P18831, Q23437
    Conserved Domains (1) summary
    pfam01484
    Location:30 → 66
    Col_cuticle_N; Nematode cuticle collagen N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P18831.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools