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C06A8.6 U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174253, updated on 2-Nov-2024

Summary

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Official Symbol
C06A8.6
Official Full Name
U2A'/phosphoprotein 32 family A C-terminal domain-containing protein
Primary source
WormBase:WBGene00015516
Locus tag
CELE_C06A8.6
See related
AllianceGenome:WB:WBGene00015516
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in cytoplasm. Orthologous to human PPP1R7 (protein phosphatase 1 regulatory subunit 7). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C06A8.6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (7772499..7773914)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Serpentine Receptor, class H Neighboring gene Centrosomal protein CEP104 N-terminal domain-containing protein;DUF2040 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative methylenetetrahydrofolate reductase (NADPH) Neighboring gene snRNA-activating protein complex subunit 1 Neighboring gene Spindly-like protein spdl-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
U2A'/phosphoprotein 32 family A C-terminal domain-containing protein
NP_495634.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7772499..7773914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063233.4 → NP_495634.1  U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495634.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17692
    Conserved Domains (3) summary
    smart00446
    Location:293 → 310
    LRRcap; occurring C-terminal to leucine-rich repeats
    sd00033
    Location:56 → 77
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:2 → 279
    internalin_A; class 1 internalin InlA
Nucleotide Protein
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