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F22B5.10 Calcium load-activated calcium channel homolog [ Caenorhabditis elegans ]

Gene ID: 174352, updated on 2-Nov-2024

Summary

Official Symbol
F22B5.10
Official Full Name
Calcium load-activated calcium channel homolog
Primary source
WormBase:WBGene00009045
Locus tag
CELE_F22B5.10
See related
AllianceGenome:WB:WBGene00009045
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium channel activity. Involved in calcium ion transmembrane transport and endoplasmic reticulum calcium ion homeostasis. Located in striated muscle dense body. Human ortholog(s) of this gene implicated in craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 1. Orthologous to human TMCO1 (transmembrane and coiled-coil domains 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See F22B5.10 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003280.10 (8467174..8468010)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Zygote defective protein 9 Neighboring gene Phenylalanine--tRNA ligase beta subunit Neighboring gene T-complex protein 11-like protein 1 Neighboring gene ShKT domain-containing protein Neighboring gene pseudo

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables calcium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in striated muscle dense body HDA PubMed 

General protein information

Preferred Names
Calcium load-activated calcium channel homolog
NP_495786.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8467174..8468010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063385.8NP_495786.1  Calcium load-activated calcium channel homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495786.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q19714
    Conserved Domains (1) summary
    pfam01956
    Location:6162
    DUF106; Integral membrane protein DUF106