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gldi-7 Sodium/potassium-transporting ATPase subunit beta-1-interacting protein [ Caenorhabditis elegans ]

Gene ID: 174365, updated on 2-Nov-2024

Summary

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Official Symbol
gldi-7
Official Full Name
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein
Primary source
WormBase:WBGene00011760
Locus tag
CELE_T13H5.6
See related
AllianceGenome:WB:WBGene00011760
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Is expressed in head mesodermal cell; intestine; nervous system; pharynx; and seam cell. Orthologous to several human genes including NKAIN2 (sodium/potassium transporting ATPase interacting 2); NKAIN3 (sodium/potassium transporting ATPase interacting 3); and NKAIN4 (sodium/potassium transporting ATPase interacting 4). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See gldi-7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (8526799..8531222, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene GH18 domain-containing protein Neighboring gene Matrin-type domain-containing protein Neighboring gene 28S ribosomal protein S18-2, mitochondrial Neighboring gene ncRNA Neighboring gene DUF148 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dose-dependent functions of SWI/SNF BAF in permitting and inhibiting cell proliferation in vivo. van der Vaart A, et al. Sci Adv, 2020 May. PMID 32494730, Free PMC Article
  2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in regulation of sodium ion transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of sodium ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein
NP_495801.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8526799..8531222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063400.7 → NP_495801.1  Sodium/potassium-transporting ATPase subunit beta-1-interacting protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495801.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U369
    Conserved Domains (1) summary
    pfam05640
    Location:16 → 155
    NKAIN; Na,K-Atpase Interacting protein
Nucleotide Protein
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