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F46C5.6 Serine/threonine-protein phosphatase 4 regulatory subunit 4 [ Caenorhabditis elegans ]

Gene ID: 174413, updated on 2-Nov-2024

Summary

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Official Symbol
F46C5.6
Official Full Name
Serine/threonine-protein phosphatase 4 regulatory subunit 4
Primary source
WormBase:WBGene00009781
Locus tag
CELE_F46C5.6
See related
AllianceGenome:WB:WBGene00009781
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein phosphatase regulator activity. Predicted to be part of protein serine/threonine phosphatase complex. Predicted to be active in cytosol. Is expressed in hypodermis and pharynx. Orthologous to human PPP4R4 (protein phosphatase 4 regulatory subunit 4). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F46C5.6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
16
Sequence:
Chromosome: II; NC_003280.10 (8840200..8844515, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Alanine--glyoxylate aminotransferase Neighboring gene Acyltransferase 3 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein phosphatase regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of protein serine/threonine phosphatase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Serine/threonine-protein phosphatase 4 regulatory subunit 4
NP_495884.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8840200..8844515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063483.6 → NP_495884.3  Serine/threonine-protein phosphatase 4 regulatory subunit 4 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495884.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGI8
    Conserved Domains (3) summary
    COG5657
    Location:233 → 478
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    pfam15548
    Location:761 → 839
    DUF4655; Domain of unknown function (DUF4655)
    sd00044
    Location:202 → 231
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
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