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T07D4.2 UPF0046 protein T07D4.2 [ Caenorhabditis elegans ]

Gene ID: 174416, updated on 2-Nov-2024

Summary

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Official Symbol
T07D4.2
Official Full Name
UPF0046 protein T07D4.2
Primary source
WormBase:WBGene00011579
Locus tag
CELE_T07D4.2
See related
AllianceGenome:WB:WBGene00011579
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity. Orthologous to human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T07D4.2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
11
Sequence:
Chromosome: II; NC_003280.10 (8869549..8873942, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene V-SNARE coiled-coil homology domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
UPF0046 protein T07D4.2
NP_001022323.2
  • Confirmed by transcript evidence
NP_001022324.2
  • Confirmed by transcript evidence
NP_001076633.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8869549..8873942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001027153.4 → NP_001022324.2  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022324.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0FLR0, Q22306, Q6BEU9
    Conserved Domains (3) summary
    cd07379
    Location:136 → 354
    MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
    pfam00149
    Location:136 → 338
    Metallophos; Calcineurin-like phosphoesterase
    cl13995
    Location:151 → 300
    MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain

  2. NM_001083164.4 → NP_001076633.1  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001076633.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q22306
    Conserved Domains (3) summary
    cd07379
    Location:112 → 330
    MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
    pfam00149
    Location:112 → 314
    Metallophos; Calcineurin-like phosphoesterase
    cl13995
    Location:127 → 276
    MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain

  3. NM_001027152.3 → NP_001022323.2  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022323.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q22306
    Conserved Domains (3) summary
    cd07379
    Location:96 → 314
    MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
    pfam00149
    Location:96 → 298
    Metallophos; Calcineurin-like phosphoesterase
    cl13995
    Location:111 → 260
    MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q22306.3

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