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mrpl-50 Large ribosomal subunit protein mL50 [ Caenorhabditis elegans ]

Gene ID: 174422, updated on 2-Nov-2024

Summary

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Official Symbol
mrpl-50
Official Full Name
Large ribosomal subunit protein mL50
Primary source
WormBase:WBGene00011883
Locus tag
CELE_T21B10.1
See related
AllianceGenome:WB:WBGene00011883
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL50 (mitochondrial ribosomal protein L50). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mrpl-50 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (8929841..8930940)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Glycine-rich protein Neighboring gene ncRNA Neighboring gene T-complex protein 1 subunit beta Neighboring gene Enolase Neighboring gene THO complex subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lifespan regulation by evolutionarily conserved genes essential for viability. Curran SP, et al. PLoS Genet, 2007 Apr 6. PMID 17411345, Free PMC Article
  2. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
  3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  5. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Large ribosomal subunit protein mL50
NP_495899.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8929841..8930940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063498.6 → NP_495899.1  Large ribosomal subunit protein mL50 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495899.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22623
    Conserved Domains (1) summary
    pfam10501
    Location:92 → 194
    Ribosomal_L50; Ribosomal subunit 39S
Nucleotide Protein
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