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mrps-22 Mitochondrial Ribosomal Protein, Small [ Caenorhabditis elegans ]

Gene ID: 174632, updated on 2-Nov-2024

Summary

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Official Symbol
mrps-22
Official Full Name
Mitochondrial Ribosomal Protein, Small
Primary source
WormBase:WBGene00007564
Locus tag
CELE_C14A4.14
See related
AllianceGenome:WB:WBGene00007564
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 5 and ovarian dysgenesis 7. Orthologous to human MRPS22 (mitochondrial ribosomal protein S22). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mrps-22 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (10582618..10584236)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Deoxyhypusine hydroxylase Neighboring gene Small ribosomal subunit protein mS29 Neighboring gene Alpha-1,2-mannosyltransferase algn-9 Neighboring gene Exosome complex component 10 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
  2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Mitochondrial Ribosomal Protein, Small
NP_496281.1
  • Product from WormBase gene class mrps;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    10582618..10584236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063880.7 → NP_496281.1  Mitochondrial Ribosomal Protein, Small [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496281.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3Q0
    Conserved Domains (1) summary
    pfam10245
    Location:40 → 282
    MRP-S22; Mitochondrial 28S ribosomal protein S22
Nucleotide Protein
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