U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cey-1 CSD domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174690, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
cey-1
Official Full Name
CSD domain-containing protein
Primary source
WormBase:WBGene00000472
Locus tag
CELE_F33A8.3
See related
AllianceGenome:WB:WBGene00000472
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable nucleic acid binding activity. Predicted to be involved in regulation of gene expression. Located in endoplasmic reticulum. Is expressed in germ cell; germ line; muscle cell; pharynx; and somatic cell. Orthologous to several human genes including YBX3 (Y-box binding protein 3). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cey-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (11039348..11041206, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein Neighboring gene ncRNA Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene CTCHY-type domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome-wide analysis of GLD-1-mediated mRNA regulation suggests a role in mRNA storage. Scheckel C, et al. PLoS Genet, 2012 May. PMID 22693456, Free PMC Article
  2. Repression of gene expression in the embryonic germ lineage of C. elegans. Seydoux G, et al. Nature, 1996 Aug 22. PMID 8751441
  3. Distinct requirements for somatic and germline expression of a generally expressed Caernorhabditis elegans gene. Kelly WG, et al. Genetics, 1997 May. PMID 9136012, Free PMC Article
  4. Systemic regulation of mitochondria by germline proteostasis prevents protein aggregation in the soma of C. elegans. Calculli G, et al. Sci Adv, 2021 Jun. PMID 34172445, Free PMC Article
  5. Soma-germline asymmetry in the distributions of embryonic RNAs in Caenorhabditis elegans. Seydoux G, et al. Development, 1994 Oct. PMID 7607073

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables nucleic acid binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
CSD domain-containing protein
NP_496366.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    11039348..11041206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063965.7 → NP_496366.1  CSD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496366.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O62213
    Conserved Domains (1) summary
    pfam00313
    Location:21 → 90
    CSD; 'Cold-shock' DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous