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T06D8.10 Peroxidase [ Caenorhabditis elegans ]

Gene ID: 174717, updated on 2-Nov-2024

Summary

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Official Symbol
T06D8.10
Official Full Name
Peroxidase
Primary source
WormBase:WBGene00011530
Locus tag
CELE_T06D8.10
See related
AllianceGenome:WB:WBGene00011530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T06D8.10 in Genome Data Viewer
Location:
chromosome: II
Exon count:
12
Sequence:
Chromosome: II; NC_003280.10 (11240932..11247514, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene FUN14 domain-containing protein fndc-1 Neighboring gene ncRNA Neighboring gene 26S proteasome non-ATPase regulatory subunit 13 Neighboring gene Store-operated calcium entry-associated regulatory factor Neighboring gene ncRNA Neighboring gene Apple domain-containing protein Neighboring gene Nuclear receptor domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
  2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables peroxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
  
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Peroxidase
NP_496407.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    11240932..11247514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064006.8 → NP_496407.1  Peroxidase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496407.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECK5
    Conserved Domains (2) summary
    cd09823
    Location:998 → 1381
    peroxinectin_like; peroxinectin_like animal heme peroxidases
    pfam03098
    Location:847 → 1382
    An_peroxidase; Animal haem peroxidase
Nucleotide Protein
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