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arrd-7 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174847, updated on 2-Nov-2024

Summary

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Official Symbol
arrd-7
Official Full Name
Arrestin C-terminal-like domain-containing protein
Primary source
WormBase:WBGene00012464
Locus tag
CELE_Y17G7B.11
See related
AllianceGenome:WB:WBGene00012464
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Orthologous to several human genes including ARRDC2 (arrestin domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See arrd-7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (12060232..12062621, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Inositol-pentakisphosphate 2-kinase Neighboring gene NAD kinase 2, mitochondrial Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene C2H2-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Arrestin C-terminal-like domain-containing protein
NP_496567.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12060232..12062621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064166.4 → NP_496567.2  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496567.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXI4
    Conserved Domains (3) summary
    smart01017
    Location:178 → 316
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    PRK14951
    Location:316 → 415
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    pfam00339
    Location:4 → 156
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
Nucleotide Protein
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