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Y46G5A.29 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 174922, updated on 2-Nov-2024

Summary

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Official Symbol
Y46G5A.29
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00012917
Locus tag
CELE_Y46G5A.29
See related
AllianceGenome:WB:WBGene00012917
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y46G5A.29 in Genome Data Viewer
Location:
chromosome: II
Exon count:
12
Sequence:
Chromosome: II; NC_003280.10 (12856200..12862058)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Patterned expression site protein 10 Neighboring gene MI domain-containing protein Neighboring gene ncRNA Neighboring gene Sodium-dependent transporter snf-5 Neighboring gene Glycogen [starch] synthase Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Uncharacterized protein
NP_496734.4
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12856200..12862058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064333.5 → NP_496734.4  Uncharacterized protein CELE_Y46G5A.29 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496734.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U2D5
    Conserved Domains (3) summary
    cd07828
    Location:574 → 749
    nitrobindin; nitrobindin heme-binding domain
    cd00054
    Location:481 → 516
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd08544
    Location:41 → 181
    Reeler; Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins
Nucleotide Protein
Heading Accession and Version

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