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Y48C3A.5 Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 174973, updated on 2-Nov-2024

Summary

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Official Symbol
Y48C3A.5
Official Full Name
Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein
Primary source
WormBase:WBGene00012989
Locus tag
CELE_Y48C3A.5
See related
AllianceGenome:WB:WBGene00012989
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y48C3A.5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Sequence:
Chromosome: II; NC_003280.10 (13271076..13304224)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Failed axon connections homolog Neighboring gene Protein mac-1 Neighboring gene Single-stranded DNA-binding protein homolog sam-10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein
NP_001364557.1
  • Confirmed by transcript evidence
NP_001379439.1
  • Confirmed by transcript evidence; Similar to
NP_496810.3
  • Partially confirmed by transcript evidence
NP_872045.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    13271076..13304224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001377889.2 → NP_001364557.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9MN21

  2. NM_064409.7 → NP_496810.3  Serine-rich adhesin for platelets [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496810.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8I0Z6

  3. NM_182245.4 → NP_872045.2  Uncharacterized protein CELE_Y48C3A.5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_872045.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8I0Z5

  4. NM_001393220.1 → NP_001379439.1  uncharacterized protein CELE_Y48C3A.5 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q599F7
    Conserved Domains (1) summary
    PTZ00449
    Location:16 → 143
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
Nucleotide Protein
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