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Y50D7A.8 PDZ domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175194, updated on 2-Nov-2024

Summary

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Official Symbol
Y50D7A.8
Official Full Name
PDZ domain-containing protein
Primary source
WormBase:WBGene00021756
Locus tag
CELE_Y50D7A.8
See related
AllianceGenome:WB:WBGene00021756
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in head; intestine; and pharynx. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y50D7A.8 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (333618..343241, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene DUF295 domain-containing protein;F-box domain-containing protein Neighboring gene ncRNA Neighboring gene Alkyldihydroxyacetonephosphate synthase Neighboring gene ADF-H domain-containing protein Neighboring gene BZIP domain-containing protein Neighboring gene ncRNA Neighboring gene Phosphoinositide phospholipase C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
PDZ domain-containing protein
NP_001370839.1
  • Confirmed by transcript evidence
NP_001379297.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    333618..343241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001384003.2 → NP_001370839.1  PDZ domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N3K5
    Conserved Domains (1) summary
    PTZ00121
    Location:568 → 678
    PTZ00121; MAEBL; Provisional

  2. NM_001393252.1 → NP_001379297.1  PDZ domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A6V7QZF0
    Conserved Domains (1) summary
    PTZ00121
    Location:505 → 615
    PTZ00121; MAEBL; Provisional
Nucleotide Protein
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