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H14E04.2 Nucleoside phosphorylase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175356, updated on 2-Nov-2024

Summary

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Official Symbol
H14E04.2
Official Full Name
Nucleoside phosphorylase domain-containing protein
Primary source
WormBase:WBGene00019199
Locus tag
CELE_H14E04.2
See related
AllianceGenome:WB:WBGene00019199
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable catalytic activity. Predicted to be involved in nucleoside metabolic process. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See H14E04.2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
11
Sequence:
Chromosome: III; NC_003281.10 (2376193..2384841)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like domain-containing protein Neighboring gene protein of unknown function WSN domain-containing protein Neighboring gene Bestrophin homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cyclin-C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in nucleoside metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Nucleoside phosphorylase domain-containing protein
NP_001379998.1
  • Confirmed by transcript evidence
NP_497544.1
  • Confirmed by transcript evidence
NP_497545.1
  • Confirmed by transcript evidence
NP_741095.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    2376193..2384841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065143.7 → NP_497544.1  Nucleoside phosphorylase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497544.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L0A5
    Conserved Domains (1) summary
    cl00303
    Location:261 → 382
    PNP_UDP_1; Phosphorylase superfamily

  2. NM_171862.4 → NP_741095.1  Nucleoside phosphorylase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741095.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L0A6
    Conserved Domains (1) summary
    cl00303
    Location:265 → 386
    PNP_UDP_1; Phosphorylase superfamily

  3. NM_065144.6 → NP_497545.1  Nucleoside phosphorylase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497545.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L0A4
    Conserved Domains (1) summary
    cl00303
    Location:258 → 379
    PNP_UDP_1; Phosphorylase superfamily

  4. NM_001393296.1 → NP_001379998.1  Nucleoside phosphorylase domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8ITV4
    Conserved Domains (1) summary
    cl38914
    Location:137 → 284
    NP-I; nucleoside phosphorylase-I family
Nucleotide Protein
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