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pqn-25 Prion-like-(Q/N-rich) domain-bearing protein 25 [ Caenorhabditis elegans ]

Gene ID: 175759, updated on 2-Nov-2024

Summary

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Official Symbol
pqn-25
Official Full Name
Prion-like-(Q/N-rich) domain-bearing protein 25
Primary source
WormBase:WBGene00004114
Locus tag
CELE_D1044.3
See related
AllianceGenome:WB:WBGene00004114
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in intestine and pharyngeal gland cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pqn-25 in Genome Data Viewer
Location:
chromosome: III
Exon count:
10
Sequence:
Chromosome: III; NC_003281.10 (5509170..5512602, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Cyclin-like domain-containing protein Neighboring gene EB domain-containing protein Neighboring gene ncRNA Neighboring gene Serine/threonine-protein kinase D1044.8 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic overview of protein kinases. Manning G. WormBook, 2005 Dec 13. PMID 18050405, Free PMC Article
  2. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Prion-like-(Q/N-rich) domain-bearing protein 25
NP_741140.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    5509170..5512602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171123.6 → NP_741140.1  Prion-like-(Q/N-rich) domain-bearing protein 25 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741140.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P41951, Q95QP7
    Conserved Domains (1) summary
    pfam01683
    Location:563 → 614
    EB; EB module
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P41951.3

Gene LinkOut

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