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abu-13 Activated in Blocked Unfolded protein response [ Caenorhabditis elegans ]

Gene ID: 175970, updated on 18-Sep-2024

Summary

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Official Symbol
abu-13
Official Full Name
Activated in Blocked Unfolded protein response
Primary source
WormBase:WBGene00004133
Locus tag
CELE_F57B9.9
See related
AllianceGenome:WB:WBGene00004133
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See abu-13 in Genome Data Viewer
Location:
chromosome: III
Exon count:
7
Sequence:
Chromosome: III; NC_003281.10 (6941888..6945898, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Cell adhesion protein byn-1 Neighboring gene Tyrosine-protein kinase Neighboring gene 4-hydroxybenzoate polyprenyltransferase, mitochondrial Neighboring gene RNA helicase Neighboring gene ncRNA Neighboring gene CCR4-NOT transcription complex subunit let-711 Neighboring gene putative 26S proteasome regulatory subunit rpn-6.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neuronal GPCR controls innate immunity by regulating noncanonical unfolded protein response genes. Sun J, et al. Science, 2011 May 6. PMID 21474712, Free PMC Article
  2. Gene regulatory network inference in long-lived C. elegans reveals modular properties that are predictive of novel aging genes. Suriyalaksh M, et al. iScience, 2022 Jan 21. PMID 35036864, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Activated in Blocked Unfolded protein response
NP_001309502.1
  • Product from WormBase gene class abu;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6941888..6945898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001322632.2 → NP_001309502.1  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20936
    Conserved Domains (1) summary
    PHA03247
    Location:25 → 138
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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