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R13A5.11 Serine/threonine-protein phosphatase [ Caenorhabditis elegans ]

Gene ID: 176075, updated on 2-Nov-2024

Summary

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Official Symbol
R13A5.11
Official Full Name
Serine/threonine-protein phosphatase
Primary source
WormBase:WBGene00020053
Locus tag
CELE_R13A5.11
See related
AllianceGenome:WB:WBGene00020053
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein serine/threonine phosphatase activity. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See R13A5.11 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (7591570..7593335, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene CMP/dCMP-type deaminase domain-containing protein Neighboring gene Polycystin cation channel PKD1/PKD2 domain-containing protein Neighboring gene Serpentine receptor class gamma Neighboring gene DUF3955 domain-containing protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Serine/threonine-protein phosphatase
NP_001299879.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7591570..7593335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001312950.4 → NP_001299879.1  Serine/threonine-protein phosphatase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34350
    UniProtKB/TrEMBL
    A0A0K3AU53
    Conserved Domains (2) summary
    smart00156
    Location:164 → 437
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    cd00144
    Location:194 → 422
    MPP_PPP_family; phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain
Nucleotide Protein
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