K02D10.1 Glycerol-3-phosphate phosphatase;Putative NipSnap protein K02D10.1 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: K02D10.1
Official Full Name: Glycerol-3-phosphate phosphatase;Putative NipSnap protein K02D10.1
Primary source: WormBase:WBGene00019301
Locus tag: CELE_K02D10.1
See related: AllianceGenome:WB:WBGene00019301
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable metal ion binding activity and phosphatase activity. Predicted to be active in mitochondrion. Is expressed in hypodermis. Orthologous to human NIPSNAP1 (nipsnap homolog 1) and NIPSNAP2 (nipsnap homolog 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See K02D10.1 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 6

Sequence:: Chromosome: III; NC_003281.10 (8769536..8776147)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

K02D10.2 (e-PCR)
- UniSTS:315955

K02D10.3 (e-PCR)
- UniSTS:315956

K02D10.1 (e-PCR)
- UniSTS:311363

PAR2.1 (e-PCR)
- UniSTS:316917

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables phosphatase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Glycerol-3-phosphate phosphatase;Putative NipSnap protein K02D10.1

NP_001367889.1

Partially confirmed by transcript evidence

NP_001379980.1

Confirmed by transcript evidence

NP_498939.3

Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

8769536..8776147

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001392163.1 → NP_001379980.1 Putative NipSnap protein K02D10.1 [Caenorhabditis elegans]

Status: REVIEWED

Conserved Domains (1) summary

pfam07978
Location:190 → 287

NIPSNAP
NM_001379847.2 → NP_001367889.1 Glycerol-3-phosphate phosphatase [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A9Z1J6

Conserved Domains (1) summary

cd07532
Location:10 → 283

HAD_PNPase_UmpH-like; UmpH/NagD family phosphatase para nitrophenyl phosphate phosphatase, similar to Plasmodium falciparum PNPase
NM_066538.4 → NP_498939.3 Putative NipSnap protein K02D10.1 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_498939.3

Status: REVIEWED

UniProtKB/Swiss-Prot

O61223, P34492, Q95QD2

Conserved Domains (4) summary

TIGR01460
Location:18 → 264

HAD-SF-IIA; Haloacid Dehalogenase Superfamily Class (subfamily) IIA

pfam07978
Location:427 → 524

NIPSNAP; NIPSNAP

pfam13242
Location:219 → 260

Hydrolase_like; HAD-hyrolase-like

pfam13344
Location:18 → 121

Hydrolase_6; Haloacid dehalogenase-like hydrolase