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arl-5 ADP-ribosylation factor-like protein 5 [ Caenorhabditis elegans ]

Gene ID: 176392, updated on 2-Nov-2024

Summary

Official Symbol
arl-5
Official Full Name
ADP-ribosylation factor-like protein 5
Primary source
WormBase:WBGene00000189
Locus tag
CELE_ZK632.8
See related
AllianceGenome:WB:WBGene00000189
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable GTP binding activity. Involved in microtubule cytoskeleton organization. Predicted to be located in Golgi apparatus. Predicted to be active in trans-Golgi network. Orthologous to several human genes including ARL5A (ADP ribosylation factor like GTPase 5A) and ARL5B (ADP ribosylation factor like GTPase 5B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See arl-5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003281.10 (9823242..9824132)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene PAN2-PAN3 deadenylation complex subunit PAN3 Neighboring gene Protein lin-52 Neighboring gene Uncharacterized protein Neighboring gene UPF0057 membrane protein ZK632.10

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in microtubule cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein localization to Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in trans-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ADP-ribosylation factor-like protein 5
NP_001379051.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    9823242..9824132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392182.1NP_001379051.1  ADP-ribosylation factor-like protein 5 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34212
    Conserved Domains (1) summary
    cd04153
    Location:3177
    Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases