orc-4 ORC (Origin Recognition Complex) subunit [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: orc-4
Official Full Name: ORC (Origin Recognition Complex) subunit
Primary source: WormBase:WBGene00012651
Locus tag: CELE_Y39A1A.13
See related: AllianceGenome:WB:WBGene00012651
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable DNA replication origin binding activity. Predicted to be involved in DNA replication initiation. Predicted to be located in nucleus. Predicted to be part of nuclear origin of replication recognition complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See orc-4 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 7

Sequence:: Chromosome: III; NC_003281.10 (10646170..10648861)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Y39A1A.13 (e-PCR)
- UniSTS:313305

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables DNA replication origin binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in DNA replication	IEA Inferred from Electronic Annotation more info
involved_in DNA replication initiation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of nuclear origin of replication recognition complex	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of origin recognition complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ORC (Origin Recognition Complex) subunit

NP_001380211.1

Product from WormBase gene class orc;
Confirmed by transcript evidence

NP_499348.1

Product from WormBase gene class orc;
Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

10646170..10648861

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_066947.8 → NP_499348.1 ORC (Origin Recognition Complex) subunit [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_499348.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9XX16
NM_001392199.1 → NP_001380211.1 ORC (Origin Recognition Complex) subunit [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1X7RCW1