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zip-1 BZIP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 176656, updated on 2-Nov-2024

Summary

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Official Symbol
zip-1
Official Full Name
BZIP domain-containing protein
Primary source
WormBase:WBGene00006986
Locus tag
CELE_Y75B8A.35
See related
AllianceGenome:WB:WBGene00006986
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See zip-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
7
Sequence:
Chromosome: III; NC_003281.10 (12336907..12345348)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene BZIP domain-containing protein Neighboring gene ncRNA Neighboring gene Serine/threonine-protein phosphatase 4 catalytic subunit 1 Neighboring gene FAM172 family protein homolog Y75B8A.31 Neighboring gene BZIP domain-containing protein Neighboring gene Serpentine receptor class gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans immune responses to microsporidia and viruses. González R, et al. Dev Comp Immunol, 2024 May. PMID 38325500
  2. RNA Fluorescence in situ Hybridization (FISH) to Visualize Microbial Colonization and Infection in Caenorhabditis elegans Intestines. Rivera DE, et al. J Vis Exp, 2022 Jul 27. PMID 35969095, Free PMC Article
  3. A pals-25 gain-of-function allele triggers systemic resistance against natural pathogens of C. elegans. Gang SS, et al. PLoS Genet, 2022 Oct. PMID 36191002, Free PMC Article
  4. Interference between the PHA-4 and PEB-1 transcription factors in formation of the Caenorhabditis elegans pharynx. Kalb JM, et al. J Mol Biol, 2002 Jul 19. PMID 12095247
  5. Caenorhabditis elegans algn-2 Is Critical for Longevity Conferred by Enhanced Nonsense-Mediated mRNA Decay. Kim EJE, et al. iScience, 2020 Nov 20. PMID 33225240, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BZIP domain-containing protein
NP_001293607.1
  • Confirmed by transcript evidence
NP_001369825.1
  • Confirmed by transcript evidence
NP_499602.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    12336907..12345348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067201.7 → NP_499602.3  BZIP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499602.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U1S5, Q9Y0B9

  2. NM_001383010.2 → NP_001369825.1  BZIP domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EE45, Q9Y0B9

  3. NM_001306678.3 → NP_001293607.1  BZIP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293607.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    S6FWP2
Nucleotide Protein
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