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Y111B2A.12 WD_REPEATS_REGION domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 176680, updated on 2-Nov-2024

Summary

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Official Symbol
Y111B2A.12
Official Full Name
WD_REPEATS_REGION domain-containing protein
Primary source
WormBase:WBGene00013735
Locus tag
CELE_Y111B2A.12
See related
AllianceGenome:WB:WBGene00013735
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human AAMP (angio associated migratory cell protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y111B2A.12 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (12609289..12623740)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene Enhancer of polycomb-like protein Neighboring gene ncRNA Neighboring gene Transcription initiation factor IIA subunit 2 Neighboring gene HUN domain-containing protein;Hpc2-related domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
WD_REPEATS_REGION domain-containing protein
NP_001255175.1
  • Confirmed by transcript evidence
NP_001367264.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    12609289..12623740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268246.2 → NP_001255175.1  WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255175.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R7L2
    Conserved Domains (2) summary
    sd00039
    Location:104 → 139
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:54 → 372
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. NM_001379962.1 → NP_001367264.1  WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R7L3
    Conserved Domains (2) summary
    sd00039
    Location:35 → 77
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:2 → 224
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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