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Y43F4A.1 Leishmanolysin-like peptidase [ Caenorhabditis elegans ]

Gene ID: 176737, updated on 2-Nov-2024

Summary

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Official Symbol
Y43F4A.1
Official Full Name
Leishmanolysin-like peptidase
Primary source
WormBase:WBGene00012796
Locus tag
CELE_Y43F4A.1
See related
AllianceGenome:WB:WBGene00012796
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable peptidase activity. Predicted to be involved in cell adhesion; cell division; and proteolysis. Predicted to be located in membrane. Predicted to be active in cytoplasm. Is expressed in intestine; nervous system; pharynx; and seam cell. Orthologous to human LMLN (leishmanolysin like peptidase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y43F4A.1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
12
Sequence:
Chromosome: III; NC_003281.10 (13223072..13229465)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene UDG domain-containing protein Neighboring gene Tetraspanin Neighboring gene tRNA-Tyr Neighboring gene ncRNA Neighboring gene tRNA-Asn Neighboring gene ncRNA Neighboring gene Nanos-type domain-containing protein Neighboring gene 2-oxoisovalerate dehydrogenase subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables peptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
  
involved_in cell cycle IEA
Inferred from Electronic Annotation
more info
  
involved_in cell division IEA
Inferred from Electronic Annotation
more info
  
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Leishmanolysin-like peptidase
NP_001022870.1
  • Confirmed by transcript evidence
NP_001022871.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    13223072..13229465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001027699.6 → NP_001022870.1  Leishmanolysin-like peptidase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022870.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O62446
    Conserved Domains (1) summary
    cl19482
    Location:50 → 620
    Peptidase_M8; Leishmanolysin

  2. NM_001027700.4 → NP_001022871.1  Leishmanolysin-like peptidase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022871.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7Z1J4
    Conserved Domains (1) summary
    cl19482
    Location:30 → 66
    Peptidase_M8; Leishmanolysin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O62446.1

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