cct-8 CCT-theta;T-complex protein 1 subunit theta [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: cct-8
Official Full Name: CCT-theta;T-complex protein 1 subunit theta
Primary source: WormBase:WBGene00021934
Locus tag: CELE_Y55F3AR.3
See related: AllianceGenome:WB:WBGene00021934
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Orthologous to human CCT8 (chaperonin containing TCP1 subunit 8). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cct-8 in Genome Data Viewer

Location:: chromosome: IV

Exon count:: 7

Sequence:: Chromosome: IV; NC_003282.8 (1087108..1093920, complement)

Chromosome IV - NC_003282.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Y55F3A_750.d (e-PCR)
- UniSTS:324099

Y55F3A_750.c (e-PCR)
- UniSTS:324438

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info
enables ATP-dependent protein folding chaperone	IEA Inferred from Electronic Annotation more info
enables unfolded protein binding	IBA Inferred from Biological aspect of Ancestor more info
enables unfolded protein binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein folding	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein folding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of chaperonin-containing T-complex	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CCT-theta;T-complex protein 1 subunit theta

NP_001294477.1

Confirmed by transcript evidence

NP_500035.3

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003282.8 Reference assembly

Range

1087108..1093920 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_067634.6 → NP_500035.3 T-complex protein 1 subunit theta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_500035.3

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9N358

Conserved Domains (1) summary

cd03341
Location:19 → 526

TCP1_theta; TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins ...
NM_001307548.3 → NP_001294477.1 CCT-theta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001294477.1

Status: REVIEWED

UniProtKB/TrEMBL

U4PBK9

Conserved Domains (2) summary

pfam00118
Location:1 → 405

Cpn60_TCP1; TCP-1/cpn60 chaperonin family

cl02777
Location:1 → 414

chaperonin_like; chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I ...