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txt-4 Fungal lipase-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 176959, updated on 2-Nov-2024

Summary

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Official Symbol
txt-4
Official Full Name
Fungal lipase-like domain-containing protein
Primary source
WormBase:WBGene00019368
Locus tag
CELE_K03H6.2
See related
AllianceGenome:WB:WBGene00019368
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in lipid metabolic process. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See txt-4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (1510564..1515457)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein SEC13 homolog Neighboring gene Phosphotransferase Neighboring gene ncRNA Neighboring gene tRNA-Asp Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C-type lectin domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Fungal lipase-like domain-containing protein
NP_001368234.1
  • Confirmed by transcript evidence
NP_500090.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    1510564..1515457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067689.6 → NP_500090.3  Fungal lipase-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500090.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61218
    Conserved Domains (1) summary
    pfam01764
    Location:132 → 268
    Lipase_3; Lipase (class 3)

  2. NM_001380046.1 → NP_001368234.1  Fungal lipase-like domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PBG9
    Conserved Domains (1) summary
    cl21494
    Location:1 → 44
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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