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mca-2 Calcium-transporting ATPase [ Caenorhabditis elegans ]

Gene ID: 177004, updated on 2-Nov-2024

Summary

Official Symbol
mca-2
Official Full Name
Calcium-transporting ATPase
Primary source
WormBase:WBGene00019875
Locus tag
CELE_R05C11.3
See related
AllianceGenome:WB:WBGene00019875
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable P-type calcium transporter activity. Predicted to be involved in regulation of cytosolic calcium ion concentration. Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle and plasma membrane. Is expressed in hypodermis. Human ortholog(s) of this gene implicated in X-linked spinocerebellar ataxia 1; autosomal dominant intellectual developmental disorder; autosomal dominant nonsyndromic deafness; and autosomal recessive nonsyndromic deafness 12. Orthologous to several human genes including ATP2B1 (ATPase plasma membrane Ca2+ transporting 1); ATP2B2 (ATPase plasma membrane Ca2+ transporting 2); and ATP2B3 (ATPase plasma membrane Ca2+ transporting 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See mca-2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
11
Sequence:
Chromosome: IV; NC_003282.8 (2084034..2091919)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Carbon storage regulator;G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene pseudo Neighboring gene pseudo

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables P-type calcium transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cytosolic calcium ion concentration IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Calcium-transporting ATPase
NP_500161.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2084034..2091919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067760.6NP_500161.1  Calcium-transporting ATPase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500161.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O76833, Q9TYP9
    Conserved Domains (7) summary
    TIGR01517
    Location:51026
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:168413
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:8411020
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:35101
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:10731096
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:648767
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:475564
    Cation_ATPase; Cation transport ATPase (P-type)