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glb-7 Globin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177008, updated on 2-Nov-2024

Summary

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Official Symbol
glb-7
Official Full Name
Globin domain-containing protein
Primary source
WormBase:WBGene00016024
Locus tag
CELE_C23H5.2
See related
AllianceGenome:WB:WBGene00016024
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Is expressed in head neurons and tail neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See glb-7 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
6
Sequence:
Chromosome: IV; NC_003282.8 (2122788..2126145)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene DUF3719 domain-containing protein Neighboring gene ncRNA Neighboring gene Ground-like domain-containing protein Neighboring gene ncRNA Neighboring gene Methyltransferase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification. Hoogewijs D, et al. BMC Evol Biol, 2008 Oct 9. PMID 18844991, Free PMC Article
  2. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen carrier activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxygen carrier activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in oxygen transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in oxygen transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to hypoxia IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Globin domain-containing protein
NP_500166.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2122788..2126145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067765.5 → NP_500166.3  Globin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500166.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YZV1
    Conserved Domains (1) summary
    cd01040
    Location:15 → 156
    Mb-like; myoglobin-like; M family globin domain
Nucleotide Protein
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