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C45G7.4 RING-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177032, updated on 2-Nov-2024

Summary

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Official Symbol
C45G7.4
Official Full Name
RING-type domain-containing protein
Primary source
WormBase:WBGene00016671
Locus tag
CELE_C45G7.4
See related
AllianceGenome:WB:WBGene00016671
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C45G7.4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (2432993..2436462)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase;Hydantoinase B/oxoprolinase domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cadherin domain-containing protein Neighboring gene ncRNA Neighboring gene Ankyrin repeat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactions within the ubiquitin pathway of Caenorhabditis elegans. Gudgen M, et al. Biochem Biophys Res Commun, 2004 Dec 10. PMID 15530417
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin protein ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
RING-type domain-containing protein
NP_500203.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2432993..2436462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067802.7 → NP_500203.1  RING-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500203.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O76354
    Conserved Domains (3) summary
    COG5432
    Location:19 → 184
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd00162
    Location:24 → 72
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl17238
    Location:23 → 73
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
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