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msp-53 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [ Caenorhabditis elegans ]

Gene ID: 177275, updated on 12-Jun-2024

Summary

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Gene symbol
msp-53
Gene description
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
Locus tag
CELE_R13H9.4
See related
AllianceGenome:WB:WBGene00003446
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in gonad; oocyte; and sperm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See msp-53 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (5064678..5065061, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Major sperm protein 55/57 Neighboring gene ncRNA Neighboring gene non-specific serine/threonine protein kinase Neighboring gene Protein kinase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic organization of major sperm protein genes and pseudogenes in the nematode Caenorhabditis elegans. Ward S, et al. J Mol Biol, 1988 Jan 5. PMID 3351915
  2. Clustered organization of reproductive genes in the C. elegans genome. Miller MA, et al. Curr Biol, 2004 Jul 27. PMID 15268860
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
NP_500714.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    5064678..5065061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068313.7 → NP_500714.1  Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500714.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53017
    Conserved Domains (1) summary
    pfam00635
    Location:9 → 114
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53017.2

Gene LinkOut

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Molecular Biology Databases
Research Materials