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sup-36 SUPpressor [ Caenorhabditis elegans ]

Gene ID: 177422, updated on 2-Nov-2024

Summary

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Official Symbol
sup-36
Official Full Name
SUPpressor
Primary source
WormBase:WBGene00018164
Locus tag
CELE_F38A5.7
See related
AllianceGenome:WB:WBGene00018164
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in embryonic digestive tract development. Is expressed in pharynx. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sup-36 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
2
Sequence:
Chromosome: IV; NC_003282.8 (6601674..6602443)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Nematode Specific Peptide family, group B Neighboring gene Transmembrane protein Neighboring gene ncRNA Neighboring gene BTB domain-containing protein Neighboring gene UDP-xylose and UDP-N-acetylglucosamine transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Two functionally distinct E2/E3 pairs coordinate sequential ubiquitination of a common substrate in Caenorhabditis elegans development. Dove KK, et al. Proc Natl Acad Sci U S A, 2017 Aug 8. PMID 28739890, Free PMC Article
  2. Implicating SCF complexes in organogenesis in Caenorhabditis elegans. Polley SR, et al. Genetics, 2014 Jan. PMID 24214340, Free PMC Article
  3. Suppressors of the organ-specific differentiation gene pha-1 of Caenorhabditis elegans. Schnabel H, et al. Genetics, 1991 Sep. PMID 1657704, Free PMC Article
  4. ARI-1, an RBR family ubiquitin-ligase, functions with UBC-18 to regulate pharyngeal development in C. elegans. Qiu X, et al. Dev Biol, 2006 Mar 15. PMID 16457801
  5. The coordinate regulation of pharyngeal development in C. elegans by lin-35/Rb, pha-1, and ubc-18. Fay DS, et al. Dev Biol, 2004 Jul 1. PMID 15196946

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic digestive tract development IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
SUPpressor
NP_501015.1
  • Product from WormBase gene class sup;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    6601674..6602443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068614.7 → NP_501015.1  SUPpressor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501015.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q94207
Nucleotide Protein
Heading Accession and Version

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