U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

T28C6.7 Kinesin motor domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177697, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
T28C6.7
Official Full Name
Kinesin motor domain-containing protein
Primary source
WormBase:WBGene00012121
Locus tag
CELE_T28C6.7
See related
AllianceGenome:WB:WBGene00012121
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in several structures, including excretory cell; intestine; nervous system; pharynx; and vulva. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See T28C6.7 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
22
Sequence:
Chromosome: IV; NC_003282.8 (8827800..8840675)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Membrane protein BRI3 Neighboring gene Uncharacterized protein Neighboring gene Centrosomal protein of 162 kDa Neighboring gene 50S ribosomal protein L17;Ribosomal_L30_N domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  2. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
  3. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
Kinesin motor domain-containing protein
NP_001255338.1
  • Confirmed by transcript evidence
NP_001255339.1
  • Confirmed by transcript evidence
NP_001294054.1
  • Confirmed by transcript evidence
NP_001294055.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    8827800..8840675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268409.4 → NP_001255338.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255338.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22847
    Conserved Domains (2) summary
    COG1196
    Location:1304 → 2054
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl19219
    Location:1936 → 2018
    DUF342; Protein of unknown function (DUF342)

  2. NM_001268410.2 → NP_001255339.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255339.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C6KRI9
    Conserved Domains (2) summary
    COG1196
    Location:1306 → 2003
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl19219
    Location:1922 → 2004
    DUF342; Protein of unknown function (DUF342)

  3. NM_001307125.3 → NP_001294054.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294054.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X5M5W2
    Conserved Domains (3) summary
    COG1196
    Location:1308 → 2058
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:260 → 1006
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:1903 → 2231
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  4. NM_001307126.3 → NP_001294055.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294055.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X5M900
    Conserved Domains (3) summary
    COG1196
    Location:1310 → 2007
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:260 → 1006
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:1889 → 2217
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools