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F49C12.11 Translation machinery-associated protein 7 homolog [ Caenorhabditis elegans ]

Gene ID: 177756, updated on 2-Nov-2024

Summary

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Official Symbol
F49C12.11
Official Full Name
Translation machinery-associated protein 7 homolog
Primary source
WormBase:WBGene00009880
Locus tag
CELE_F49C12.11
See related
AllianceGenome:WB:WBGene00009880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in coelomocyte; hypodermis; intestine; and nervous system. Orthologous to human TMA7 (translation machinery associated 7 homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F49C12.11 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (9319380..9320143)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene UBA domain-containing protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 6 Neighboring gene Methyltransferase type 11 domain-containing protein Neighboring gene DUF1648 domain-containing protein;Ribonuclease kappa Neighboring gene V-type proton ATPase subunit e Neighboring gene DUF19 domain-containing protein Neighboring gene Serine/arginine repetitive matrix protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Lehner B, et al. Nat Genet, 2006 Aug. PMID 16845399
  2. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

General protein information

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Preferred Names
Translation machinery-associated protein 7 homolog
NP_501634.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9319380..9320143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069233.9 → NP_501634.1  Translation machinery-associated protein 7 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501634.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q20588
    Conserved Domains (1) summary
    pfam09072
    Location:3 → 53
    TMA7; Translation machinery associated TMA7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q20588.1

Gene LinkOut

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