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wrt-3 Warthog protein 3 [ Caenorhabditis elegans ]

Gene ID: 177781, updated on 2-Nov-2024

Summary

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Official Symbol
wrt-3
Official Full Name
Warthog protein 3
Primary source
WormBase:WBGene00006949
Locus tag
CELE_F38E11.7
See related
AllianceGenome:WB:WBGene00006949
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in extracellular region. Is expressed in hermaphrodite distal tip cell; hypodermis; muscle cell; and pharyngeal gland cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See wrt-3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (9473633..9477456, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Adenylate kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cyclic nucleotide-binding domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nanoplastics cause transgenerational toxicity through inhibiting germline microRNA mir-38 in C. elegans. Hua X, et al. J Hazard Mater, 2022 Sep 5. PMID 35716568
  2. Induction of protective response to polystyrene nanoparticles associated with methylation regulation in Caenorhabditis elegans. Wang S, et al. Chemosphere, 2021 May. PMID 33453486
  3. Epigenetic response to nanopolystyrene in germline of nematode Caenorhabditis elegans. Yang Y, et al. Ecotoxicol Environ Saf, 2020 Dec 15. PMID 33002821
  4. Transcriptional regulation of HLH-6-independent and subtype-specific genes expressed in the Caenorhabditis elegans pharyngeal glands. Ghai V, et al. Mech Dev, 2012 Sep-Dec. PMID 22759833
  5. Polylactic acid microplastics cause transgenerational reproductive toxicity associated with activation of insulin and hedgehog ligands in C. elegans. Shao Y, et al. Sci Total Environ, 2024 Sep 10. PMID 38851356

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Warthog protein 3
NP_001294092.1
  • Confirmed by transcript evidence
NP_001379102.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9473633..9477456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392370.1 → NP_001379102.1  Warthog protein 3 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q20170, Q9XZF4

  2. NM_001307163.3 → NP_001294092.1  Warthog protein 3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294092.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    N1NSJ5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q20170.3

Gene LinkOut

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