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msp-78 Major sperm protein 78 [ Caenorhabditis elegans ]

Gene ID: 177814, updated on 2-Nov-2024

Summary

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Official Symbol
msp-78
Official Full Name
Major sperm protein 78
Primary source
WormBase:WBGene00003465
Locus tag
CELE_T13F2.11
See related
AllianceGenome:WB:WBGene00003465
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cytoplasm; cytoskeleton; and pseudopodium. Is expressed in gonad; oocyte; and sperm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See msp-78 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (9770046..9770429)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Major sperm protein 77/79 Neighboring gene pseudo Neighboring gene Caveolin;Caveolin-1 Neighboring gene Small Nuclear RNA (snRNA) Associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for phosphorylation in the MSP cytoskeletal filaments of amoeboid spermatozoa. Fraire-Zamora JJ, et al. Int J Biochem Mol Biol, 2011. PMID 22003439, Free PMC Article
  2. Genomic organization of major sperm protein genes and pseudogenes in the nematode Caenorhabditis elegans. Ward S, et al. J Mol Biol, 1988 Jan 5. PMID 3351915
  3. Clustered organization of reproductive genes in the C. elegans genome. Miller MA, et al. Curr Biol, 2004 Jul 27. PMID 15268860
  4. Gamma radiation induces life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis. Maremonti E, et al. Sci Total Environ, 2019 Dec 10. PMID 31425988
  5. The RNA-binding protein repertoire of Arabidopsis thaliana. Marondedze C, et al. Sci Rep, 2016 Jul 11. PMID 27405932, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in pseudopodium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Major sperm protein 78
NP_501742.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9770046..9770429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069341.6 → NP_501742.1  Major sperm protein 78 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501742.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94053
    Conserved Domains (1) summary
    pfam00635
    Location:9 → 114
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94053.3

Gene LinkOut

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