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ssq-1 Sperm-Specific family, class Q [ Caenorhabditis elegans ]

Gene ID: 177835, updated on 17-Oct-2024

Summary

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Official Symbol
ssq-1
Official Full Name
Sperm-Specific family, class Q
Primary source
WormBase:WBGene00006050
Locus tag
CELE_K07F5.11
See related
AllianceGenome:WB:WBGene00006050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See ssq-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (9852550..9853609)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein-tyrosine phosphatase Neighboring gene Sperm-specific class P protein 10 Neighboring gene Transmembrane protein 144 homolog Neighboring gene Nucleoporin Nup54 alpha-helical domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GLH-1/Vasa represses neuropeptide expression and drives spermiogenesis in the C. elegans germline. Rochester JD, et al. Dev Biol, 2022 Dec. PMID 36273621, Free PMC Article
  2. The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. Franziscus CA, et al. FEBS Open Bio, 2024 Mar. PMID 38320757, Free PMC Article
  3. Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression. Halaschek-Wiener J, et al. Genome Res, 2005 May. PMID 15837805, Free PMC Article
  4. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Sperm-Specific family, class Q
NP_501768.1
  • Product from WormBase gene class ssq;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9852550..9853609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069367.5 → NP_501768.1  Sperm-Specific family, class Q [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501768.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21294
Nucleotide Protein
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