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sss-1 Sperm-Specific family, class S [ Caenorhabditis elegans ]

Gene ID: 177843, updated on 18-Sep-2024

Summary

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Official Symbol
sss-1
Official Full Name
Sperm-Specific family, class S
Primary source
WormBase:WBGene00006056
Locus tag
CELE_F32B6.5
See related
AllianceGenome:WB:WBGene00006056
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See sss-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (9892739..9893749, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial Neighboring gene non-specific serine/threonine protein kinase Neighboring gene SH2 domain-containing protein Neighboring gene Major sperm protein 77/79 Neighboring gene Sperm-specific class P protein 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Roles for the RNA polymerase III regulator MAFR-1 in regulating sperm quality in Caenorhabditis elegans. Hammerquist AM, et al. Sci Rep, 2020 Nov 9. PMID 33168938, Free PMC Article
  2. Gamma radiation induces life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis. Maremonti E, et al. Sci Total Environ, 2019 Dec 10. PMID 31425988
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Sperm-Specific family, class S
NP_501780.1
  • Product from WormBase gene class sss;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9892739..9893749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069379.7 → NP_501780.1  Sperm-Specific family, class S [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501780.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XVP7
Nucleotide Protein
Heading Accession and Version

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