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msd-1 MSP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177863, updated on 2-Nov-2024

Summary

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Official Symbol
msd-1
Official Full Name
MSP domain-containing protein
Primary source
WormBase:WBGene00009680
Locus tag
CELE_F44D12.3
See related
AllianceGenome:WB:WBGene00009680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in cell body and pseudopodium. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See msd-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (10022349..10022678, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Equilibrative Nucleoside Transporter (ENT) Family Neighboring gene ncRNA Neighboring gene Phosphotriesterase-related protein Neighboring gene PHD-type domain-containing protein Neighboring gene PDZ domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MFP1/MSD-1 and MFP2/NSPH-2 co-localize with MSP during C. elegans spermatogenesis. Morrison KN, et al. MicroPubl Biol, 2021. PMID 34316545, Free PMC Article
  2. C. elegans sperm bud vesicles to deliver a meiotic maturation signal to distant oocytes. Kosinski M, et al. Development, 2005 Aug. PMID 15975936
  3. NHR-23 and SPE-44 regulate distinct sets of genes during Caenorhabditis elegans spermatogenesis. Ragle JM, et al. G3 (Bethesda), 2022 Nov 4. PMID 36135804, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell body IDA
Inferred from Direct Assay
more info
 PubMed 
located_in pseudopodium IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
MSP domain-containing protein
NP_501808.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10022349..10022678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069407.6 → NP_501808.1  MSP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501808.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEJ7
    Conserved Domains (1) summary
    pfam00635
    Location:3 → 76
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
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Gene LinkOut

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