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swt-3 Sugar transporter SWEET1 [ Caenorhabditis elegans ]

Gene ID: 177972, updated on 2-Nov-2024

Summary

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Official Symbol
swt-3
Official Full Name
Sugar transporter SWEET1
Primary source
WormBase:WBGene00007384
Locus tag
CELE_C06G8.1
See related
AllianceGenome:WB:WBGene00007384
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport. Predicted to be located in Golgi membrane. Predicted to be active in membrane. Is expressed in body wall musculature; hypodermis; intestine; somatic gonad precursor; and spermatheca. Orthologous to human SLC50A1 (solute carrier family 50 member 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See swt-3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (10778985..10780683, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating Neighboring gene Inositol polyphosphate-related phosphatase domain-containing protein Neighboring gene Serpentine receptor class delta-7 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. swt-3 transcripts are expressed in Z1/Z4 during embryogenesis and in the adult spermatheca. Updike D. MicroPubl Biol, 2017 Jul 20. PMID 32550352, Free PMC Article
  2. A starvation-induced noncoding RNA modulates expression of Dicer-regulated genes. Hellwig S, et al. Proc Natl Acad Sci U S A, 2008 Sep 2. PMID 18723671, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables sugar transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in carbohydrate transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in carbohydrate transport ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Sugar transporter SWEET1
NP_502000.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10778985..10780683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069599.7 → NP_502000.1  Sugar transporter SWEET1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502000.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17757
    Conserved Domains (1) summary
    pfam03083
    Location:128 → 213
    MtN3_slv; Sugar efflux transporter for intercellular exchange
Nucleotide Protein
Heading Accession and Version

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