U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B0001.8 GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178161, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
B0001.8
Official Full Name
GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein
Primary source
WormBase:WBGene00007093
Locus tag
CELE_B0001.8
See related
AllianceGenome:WB:WBGene00007093
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B0001.8 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (12138844..12141059, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CABIT domain-containing protein;Immunoglobulin E-set;Iron-sulfur cluster assembly accessory protein Neighboring gene ncRNA Neighboring gene putative uridine-cytidine kinase;uridine/cytidine kinase Neighboring gene MABP domain-containing protein Neighboring gene DUF4210 domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein
NP_001263796.1
  • Confirmed by transcript evidence
NP_001299935.1
  • Confirmed by transcript evidence
NP_001355518.1
  • Confirmed by transcript evidence
NP_502305.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12138844..12141059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276867.4 → NP_001263796.1  SET domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263796.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    K8ESC8

  2. NM_001368446.4 → NP_001355518.1  Tudor domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3P6NIB1
    Conserved Domains (1) summary
    pfam15301
    Location:209 → 271
    SLAIN; SLAIN motif-containing family

  3. NM_069904.7 → NP_502305.2  SET domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502305.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8WQH2

  4. NM_001313006.3 → NP_001299935.1  GTP pyrophosphokinase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ARG5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools